Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn6Q9Z262 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn6Q9Z262 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.63□□□□□ -0.39
Cldn6Q9Z262 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Gm19078-201ENSMUST00000206311 727 ntBASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Gm5161-201ENSMUST00000075243 853 ntBASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn6Q9Z262 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm11524-201ENSMUST00000119349 807 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm12403-201ENSMUST00000121384 959 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm15376-201ENSMUST00000122258 783 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm26464-201ENSMUST00000157094 305 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm7730-201ENSMUST00000212486 454 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm6218-201ENSMUST00000219812 628 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn6Q9Z262 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn6Q9Z262 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms