Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cx3cr1Q9Z0D9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Gm45612-201ENSMUST00000211320 160 ntBASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cx3cr1Q9Z0D9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cx3cr1Q9Z0D9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.4□□□□□ -0.59
Cx3cr1Q9Z0D9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cx3cr1Q9Z0D9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cx3cr1Q9Z0D9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cx3cr1Q9Z0D9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.4□□□□□ -0.59
Cx3cr1Q9Z0D9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.4□□□□□ -0.59
Cx3cr1Q9Z0D9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm15678-201ENSMUST00000117573 960 ntBASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Mir3113-201ENSMUST00000175478 76 ntBASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cx3cr1Q9Z0D9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms