Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim3Q9R1R2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gm4804-201ENSMUST00000182234 999 ntBASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gm2445-201ENSMUST00000182798 989 ntBASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gm6218-201ENSMUST00000219812 628 ntBASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim3Q9R1R2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim3Q9R1R2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim3Q9R1R2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim3Q9R1R2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim3Q9R1R2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.7□□□□□ -0.38
Trim3Q9R1R2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Mir497b-201ENSMUST00000093601 125 ntBASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Grk6-205ENSMUST00000224653 2976 ntBASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim3Q9R1R2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim3Q9R1R2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms