Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40aQ9R1C7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Gm44855-201ENSMUST00000205725 362 ntBASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Prpf40aQ9R1C7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40aQ9R1C7 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.83□□□□□ -0.03
Prpf40aQ9R1C7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40aQ9R1C7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40aQ9R1C7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Prpf40aQ9R1C7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40aQ9R1C7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40aQ9R1C7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Syt7-205ENSMUST00000224135 1557 ntBASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Gm5866-201ENSMUST00000177881 973 ntBASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40aQ9R1C7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Gm14716-201ENSMUST00000120138 718 ntBASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40aQ9R1C7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms