Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Gm25745-201ENSMUST00000174945 133 ntBASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Gm45328-201ENSMUST00000210942 917 ntBASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco4Q9JIS3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Gm8655-201ENSMUST00000221159 852 ntBASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco4Q9JIS3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Daam2-202ENSMUST00000224595 1926 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Smco4Q9JIS3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms