Protein–RNA interactions for Protein: Q9D0Z3

Tmem53, Transmembrane protein 53, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem53Q9D0Z3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tmem53Q9D0Z3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem53Q9D0Z3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gm4081-201ENSMUST00000195287 1838 ntBASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13□□□□□ -0.33
Tmem53Q9D0Z3 AC165157.4-201ENSMUST00000220587 139 ntBASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Nudt18-202ENSMUST00000228554 3619 ntBASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Gm40377-201ENSMUST00000204604 2015 ntBASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem53Q9D0Z3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem53Q9D0Z3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms