Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssu72Q9CY97 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssu72Q9CY97 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Mir1895-201ENSMUST00000122615 79 ntBASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssu72Q9CY97 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ssu72Q9CY97 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms