Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb1Q9CQ70 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm38294-201ENSMUST00000192831 381 ntBASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm7775-201ENSMUST00000218871 853 ntBASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb1Q9CQ70 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Gm4875-201ENSMUST00000118257 786 ntBASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Gm13616-201ENSMUST00000120600 222 ntBASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb1Q9CQ70 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms