Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gm23200-201ENSMUST00000104379 132 ntBASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gm8285-201ENSMUST00000208293 759 ntBASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col25a1Q99MQ5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Gm13097-201ENSMUST00000210722 397 ntBASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col25a1Q99MQ5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Gm9726-201ENSMUST00000180321 678 ntBASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col25a1Q99MQ5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms