Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Gm4857-201ENSMUST00000192718 785 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Gm37466-201ENSMUST00000195692 652 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Gm19184-201ENSMUST00000196798 928 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Gm6983-201ENSMUST00000214912 628 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.82□□□□□ -0.52
Scrt1Q99M85 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.82□□□□□ -0.52
Scrt1Q99M85 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gm15236-201ENSMUST00000117309 379 ntBASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.81□□□□□ -0.52
Scrt1Q99M85 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.81□□□□□ -0.52
Scrt1Q99M85 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scrt1Q99M85 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Scrt1Q99M85 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scrt1Q99M85 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scrt1Q99M85 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Scrt1Q99M85 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms