Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Gm3436-201ENSMUST00000179930 840 ntBASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Gm8396-201ENSMUST00000057361 823 ntBASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk5rap3Q99LM2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm25948-201ENSMUST00000175334 112 ntBASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm27430-201ENSMUST00000184585 107 ntBASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm44333-201ENSMUST00000197168 107 ntBASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm44344-201ENSMUST00000200287 129 ntBASIC13.97□□□□□ -0.17
Cdk5rap3Q99LM2 Gm43703-201ENSMUST00000200523 763 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms