Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clp1Q99LI9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Clp1Q99LI9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.14□□□□□ -0.15
Clp1Q99LI9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.14□□□□□ -0.15
Clp1Q99LI9 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.14□□□□□ -0.15
Clp1Q99LI9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Gm37042-201ENSMUST00000193816 581 ntBASIC14.14□□□□□ -0.15
Clp1Q99LI9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.14□□□□□ -0.15
Clp1Q99LI9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.14□□□□□ -0.15
Clp1Q99LI9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.14□□□□□ -0.15
Clp1Q99LI9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clp1Q99LI9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Gm14726-201ENSMUST00000120623 896 ntBASIC14.13□□□□□ -0.15
Clp1Q99LI9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Gm2594-201ENSMUST00000214774 742 ntBASIC14.13□□□□□ -0.15
Clp1Q99LI9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.13□□□□□ -0.15
Clp1Q99LI9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clp1Q99LI9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms