Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Gm26083-201ENSMUST00000157904 193 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Gm38158-201ENSMUST00000194617 339 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Gm19163-201ENSMUST00000223313 780 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm15370-201ENSMUST00000117158 253 ntBASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm7809-201ENSMUST00000153199 742 ntBASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm26185-201ENSMUST00000157692 266 ntBASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm37489-201ENSMUST00000191883 159 ntBASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd2Q99JR8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Mir877-201ENSMUST00000104738 85 ntBASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Gm13297-201ENSMUST00000120205 934 ntBASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Gm2991-201ENSMUST00000173338 480 ntBASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Gm37259-201ENSMUST00000193903 849 ntBASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 Gm4768-201ENSMUST00000206199 686 ntBASIC13.55□□□□□ -0.24
Smarcd2Q99JR8 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms