Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Gm11524-201ENSMUST00000119349 807 ntBASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha3Q91Y16 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Acot6-202ENSMUST00000222921 3622 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm12341-201ENSMUST00000119724 503 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm12091-201ENSMUST00000146791 830 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Gm19078-201ENSMUST00000206311 727 ntBASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms