Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Gm44719-201ENSMUST00000206404 149 ntBASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga3Q91XY5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga3Q91XY5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms