Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga4Q91XY4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Mir698-201ENSMUST00000102164 109 ntBASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga4Q91XY4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm15240-201ENSMUST00000118156 720 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm8927-201ENSMUST00000181978 981 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm45668-201ENSMUST00000211271 493 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm3222-201ENSMUST00000071282 990 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhga4Q91XY4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms