Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Usb1Q91W78 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usb1Q91W78 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usb1Q91W78 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usb1Q91W78 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usb1Q91W78 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usb1Q91W78 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm8927-201ENSMUST00000181978 981 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm9794-201ENSMUST00000202370 423 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm3222-201ENSMUST00000071282 990 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.36□□□□□ -0.27
Usb1Q91W78 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Usb1Q91W78 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usb1Q91W78 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.35□□□□□ -0.27
Usb1Q91W78 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Mir698-201ENSMUST00000102164 109 ntBASIC13.35□□□□□ -0.27
Usb1Q91W78 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gm5354-201ENSMUST00000182417 973 ntBASIC13.35□□□□□ -0.27
Usb1Q91W78 Gm45668-201ENSMUST00000211271 493 ntBASIC13.35□□□□□ -0.27
Usb1Q91W78 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Usb1Q91W78 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usb1Q91W78 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usb1Q91W78 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usb1Q91W78 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Usb1Q91W78 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usb1Q91W78 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.34□□□□□ -0.27
Usb1Q91W78 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms