Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Mir7085-201ENSMUST00000184353 66 ntBASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gm27892-201ENSMUST00000185017 106 ntBASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gm44719-201ENSMUST00000206404 149 ntBASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Gm15824-201ENSMUST00000119516 955 ntBASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Gm15376-201ENSMUST00000122258 783 ntBASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx41Q91VN6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Gm6244-201ENSMUST00000178732 841 ntBASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Gm2495-201ENSMUST00000191160 466 ntBASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx41Q91VN6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms