Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.31□□□□□ -0.28
Vsx1Q91V10 Gm6621-201ENSMUST00000193251 772 ntBASIC13.31□□□□□ -0.28
Vsx1Q91V10 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.31□□□□□ -0.28
Vsx1Q91V10 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.31□□□□□ -0.28
Vsx1Q91V10 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.31□□□□□ -0.28
Vsx1Q91V10 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vsx1Q91V10 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm38158-201ENSMUST00000194617 339 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Itm2b-204ENSMUST00000228637 783 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.3□□□□□ -0.28
Vsx1Q91V10 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx1Q91V10 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm15370-201ENSMUST00000117158 253 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.29□□□□□ -0.28
Vsx1Q91V10 Gm14381-201ENSMUST00000122105 414 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms