Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SfpqQ8VIJ6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SfpqQ8VIJ6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SfpqQ8VIJ6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Gm15653-201ENSMUST00000119247 907 ntBASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SfpqQ8VIJ6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm22065-201ENSMUST00000103753 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm22066-201ENSMUST00000103761 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24932-201ENSMUST00000103763 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24115-201ENSMUST00000103799 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm22190-201ENSMUST00000103827 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm22191-201ENSMUST00000103831 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24721-201ENSMUST00000103849 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm28018-201ENSMUST00000103869 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm26399-201ENSMUST00000103937 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm12428-201ENSMUST00000119844 727 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm13385-201ENSMUST00000121089 220 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm25911-201ENSMUST00000157621 56 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm25349-201ENSMUST00000177728 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm23616-201ENSMUST00000177797 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm25871-201ENSMUST00000177816 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24752-201ENSMUST00000178240 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24496-201ENSMUST00000178287 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm25649-201ENSMUST00000178476 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm25548-201ENSMUST00000178681 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm23147-201ENSMUST00000178841 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm26095-201ENSMUST00000179270 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm22171-201ENSMUST00000179283 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm23936-201ENSMUST00000179354 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm22619-201ENSMUST00000179516 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm25255-201ENSMUST00000179579 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24755-201ENSMUST00000179691 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm26506-201ENSMUST00000179692 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm25086-201ENSMUST00000179931 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm23243-201ENSMUST00000180047 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24659-201ENSMUST00000180212 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm24169-201ENSMUST00000180244 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm23689-201ENSMUST00000180354 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm4804-201ENSMUST00000182234 999 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm27359-201ENSMUST00000184153 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm27785-201ENSMUST00000184268 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm27466-201ENSMUST00000184396 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm27703-201ENSMUST00000184836 110 ntBASIC14.21□□□□□ -0.13
SfpqQ8VIJ6 Gm8000-201ENSMUST00000188378 592 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms