Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh18Q8VHR0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh18Q8VHR0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Matn2-203ENSMUST00000226766 3252 ntBASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh18Q8VHR0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Gm25911-201ENSMUST00000157621 56 ntBASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Gm18889-201ENSMUST00000174284 929 ntBASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh18Q8VHR0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh18Q8VHR0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh18Q8VHR0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh18Q8VHR0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh18Q8VHR0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh18Q8VHR0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh18Q8VHR0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms