Protein–RNA interactions for Protein: Q8VCC8

Rapgef3, Rap guanine nucleotide exchange factor 3, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef3Q8VCC8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Gm37827-201ENSMUST00000194486 1542 ntBASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rapgef3Q8VCC8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm25880-201ENSMUST00000104331 132 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm15515-201ENSMUST00000117827 822 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm13736-201ENSMUST00000119272 253 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm29615-201ENSMUST00000185371 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm28224-201ENSMUST00000186078 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm29001-201ENSMUST00000186177 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm28292-201ENSMUST00000186593 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm28101-201ENSMUST00000187608 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm29076-201ENSMUST00000187689 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm28302-201ENSMUST00000187931 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm28646-201ENSMUST00000188220 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm28205-201ENSMUST00000189177 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm29032-201ENSMUST00000189797 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm28695-201ENSMUST00000190300 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm37448-201ENSMUST00000192795 697 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Gm19287-201ENSMUST00000203190 358 ntBASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC18.05■□□□□ 0.48
Rapgef3Q8VCC8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 AC154176.1-201ENSMUST00000225897 220 ntBASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Efs-202ENSMUST00000227037 2540 ntBASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Rapgef3Q8VCC8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Gm7899-201ENSMUST00000192935 1897 ntBASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rapgef3Q8VCC8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms