Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Gm7775-201ENSMUST00000218871 853 ntBASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm1Q8VC85 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Lsm1Q8VC85 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm1Q8VC85 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm1Q8VC85 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm1Q8VC85 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm1Q8VC85 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm1Q8VC85 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.96□□□□□ -0.34
Lsm1Q8VC85 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm13223-201ENSMUST00000118609 747 ntBASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm17837-201ENSMUST00000186435 985 ntBASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm18905-201ENSMUST00000205454 928 ntBASIC12.95□□□□□ -0.34
Lsm1Q8VC85 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm1Q8VC85 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Gm4875-201ENSMUST00000118257 786 ntBASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Gm9063-201ENSMUST00000223299 582 ntBASIC12.94□□□□□ -0.34
Lsm1Q8VC85 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm1Q8VC85 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm1Q8VC85 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms