Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Gm29608-201ENSMUST00000190444 463 ntBASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.79□□□□□ -0.04
Rpap2Q8VC34 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpap2Q8VC34 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm18018-201ENSMUST00000198273 408 ntBASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpap2Q8VC34 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpap2Q8VC34 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Gm6983-201ENSMUST00000214912 628 ntBASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpap2Q8VC34 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms