Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44357-201ENSMUST00000195897 142 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm19658-201ENSMUST00000196231 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44367-201ENSMUST00000196836 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44350-201ENSMUST00000197197 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44390-201ENSMUST00000197533 144 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44313-201ENSMUST00000198018 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44486-201ENSMUST00000198508 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44314-201ENSMUST00000199263 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44394-201ENSMUST00000199558 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44484-201ENSMUST00000199873 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44466-201ENSMUST00000200264 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm44359-201ENSMUST00000200671 138 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc9Q8VC31 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Gm6296-201ENSMUST00000222599 943 ntBASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms