Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Top1mtQ8R4U6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Top1mtQ8R4U6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Gm15678-201ENSMUST00000117573 960 ntBASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Gm2423-201ENSMUST00000074863 733 ntBASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.12■□□□□ 0.17
Top1mtQ8R4U6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Gm27437-201ENSMUST00000183429 107 ntBASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Mir6977-201ENSMUST00000184960 64 ntBASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Top1mtQ8R4U6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms