Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CroccQ8CJ40 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CroccQ8CJ40 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CroccQ8CJ40 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CroccQ8CJ40 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.9□□□□□ -0.35
CroccQ8CJ40 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.9□□□□□ -0.35
CroccQ8CJ40 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.89□□□□□ -0.35
CroccQ8CJ40 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.89□□□□□ -0.35
CroccQ8CJ40 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.89□□□□□ -0.35
CroccQ8CJ40 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CroccQ8CJ40 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm2495-201ENSMUST00000191160 466 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Gm6152-201ENSMUST00000151704 340 ntBASIC12.88□□□□□ -0.35
CroccQ8CJ40 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CroccQ8CJ40 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms