Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vcpip1Q8CDG3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Gm24420-201ENSMUST00000176676 59 ntBASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Gm17837-201ENSMUST00000186435 985 ntBASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Gm2423-201ENSMUST00000074863 733 ntBASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vcpip1Q8CDG3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vcpip1Q8CDG3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gm27306-201ENSMUST00000183970 107 ntBASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gm27989-201ENSMUST00000184721 107 ntBASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gm7775-201ENSMUST00000218871 853 ntBASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Vcpip1Q8CDG3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms