Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pabpn1Q8CCS6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Gm27910-201ENSMUST00000185004 107 ntBASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Gm43416-201ENSMUST00000201916 1015 ntBASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 AC166051.1-201ENSMUST00000214313 210 ntBASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Gm37411-201ENSMUST00000194180 2282 ntBASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pabpn1Q8CCS6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Gm14219-201ENSMUST00000120414 288 ntBASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Gm14999-201ENSMUST00000121039 624 ntBASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Gm43275-201ENSMUST00000202053 1020 ntBASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Gm43205-201ENSMUST00000198622 1968 ntBASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pabpn1Q8CCS6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Gm9129-201ENSMUST00000218173 1689 ntBASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Gm21998-201ENSMUST00000117552 1308 ntBASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pabpn1Q8CCS6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gm5525-201ENSMUST00000190438 1312 ntBASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gm5909-201ENSMUST00000119768 1281 ntBASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gm1848-201ENSMUST00000120711 789 ntBASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gm12196-201ENSMUST00000120954 262 ntBASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gm28882-201ENSMUST00000185504 314 ntBASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 AC122408.1-201ENSMUST00000218949 218 ntBASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gm270-201ENSMUST00000223010 976 ntBASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Pabpn1Q8CCS6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms