Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Gm5264-201ENSMUST00000190584 848 ntBASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lysmd4Q8CC84 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lysmd4Q8CC84 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Lysmd4Q8CC84 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lysmd4Q8CC84 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.47
Lysmd4Q8CC84 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.08□□□□□ -0.47
Lysmd4Q8CC84 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lysmd4Q8CC84 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Gm13385-201ENSMUST00000121089 220 ntBASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Mir7221-201ENSMUST00000184009 72 ntBASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Gm33320-201ENSMUST00000192232 530 ntBASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lysmd4Q8CC84 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Gm25287-201ENSMUST00000103846 110 ntBASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Gm22918-201ENSMUST00000103855 110 ntBASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Mir874-201ENSMUST00000104769 76 ntBASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Gm9824-201ENSMUST00000178707 561 ntBASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Gm21470-201ENSMUST00000187680 696 ntBASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms