Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
Trub1Q8C0D0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trub1Q8C0D0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trub1Q8C0D0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trub1Q8C0D0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trub1Q8C0D0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trub1Q8C0D0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Syt7-205ENSMUST00000224135 1557 ntBASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm29608-201ENSMUST00000190444 463 ntBASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Gm38144-201ENSMUST00000192790 465 ntBASIC13.89□□□□□ -0.19
Trub1Q8C0D0 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trub1Q8C0D0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms