Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp43Q8BUM9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Gm12341-201ENSMUST00000119724 503 ntBASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.66□□□□□ -0.22
Usp43Q8BUM9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp43Q8BUM9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp43Q8BUM9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.65□□□□□ -0.23
Usp43Q8BUM9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Usp43Q8BUM9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Gm12859-201ENSMUST00000117834 427 ntBASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.64□□□□□ -0.23
Usp43Q8BUM9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms