Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Gm9385-201ENSMUST00000117563 472 ntBASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco3Q8BQM7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Smco3Q8BQM7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Smco3Q8BQM7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Smco3Q8BQM7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smco3Q8BQM7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Gm25927-201ENSMUST00000175058 117 ntBASIC11.07□□□□□ -0.64
Smco3Q8BQM7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Mir8098-201ENSMUST00000184011 137 ntBASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms