Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Mir6392-201ENSMUST00000184924 108 ntBASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Gm18624-201ENSMUST00000220966 658 ntBASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.77□□□□□ -0.21
Sfr1Q8BP27 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.77□□□□□ -0.21
Sfr1Q8BP27 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.76□□□□□ -0.21
Sfr1Q8BP27 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Gm15770-201ENSMUST00000117498 584 ntBASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Gm12485-201ENSMUST00000119641 291 ntBASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Gm45668-201ENSMUST00000211271 493 ntBASIC13.76□□□□□ -0.21
Sfr1Q8BP27 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sfr1Q8BP27 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Gm12341-201ENSMUST00000119724 503 ntBASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Gm18018-201ENSMUST00000198273 408 ntBASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sfr1Q8BP27 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sfr1Q8BP27 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sfr1Q8BP27 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sfr1Q8BP27 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms