Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank2Q80Z38 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank2Q80Z38 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.08■□□□□ 0.32
Shank2Q80Z38 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.08■□□□□ 0.32
Shank2Q80Z38 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.08■□□□□ 0.32
Shank2Q80Z38 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.08■□□□□ 0.32
Shank2Q80Z38 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank2Q80Z38 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank2Q80Z38 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Shank2Q80Z38 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm8194-201ENSMUST00000159783 859 ntBASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm6407-201ENSMUST00000176468 549 ntBASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm45495-201ENSMUST00000200940 1700 ntBASIC17.07■□□□□ 0.32
Shank2Q80Z38 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Daam2-202ENSMUST00000224595 1926 ntBASIC17.07■□□□□ 0.32
Shank2Q80Z38 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank2Q80Z38 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Gm13492-201ENSMUST00000119772 665 ntBASIC17.06■□□□□ 0.32
Shank2Q80Z38 Gm14665-201ENSMUST00000122294 557 ntBASIC17.06■□□□□ 0.32
Shank2Q80Z38 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Rprl1-202ENSMUST00000198476 238 ntBASIC17.06■□□□□ 0.32
Shank2Q80Z38 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.06■□□□□ 0.32
Shank2Q80Z38 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank2Q80Z38 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm13296-201ENSMUST00000117854 997 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm12266-201ENSMUST00000120311 962 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm45433-201ENSMUST00000209386 247 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm22058-201ENSMUST00000083393 310 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm5070-201ENSMUST00000177599 862 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm44651-201ENSMUST00000207343 372 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 Gm5904-201ENSMUST00000210286 865 ntBASIC17.05■□□□□ 0.32
Shank2Q80Z38 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank2Q80Z38 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms