Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Gm5186-201ENSMUST00000218781 920 ntBASIC13.03□□□□□ -0.32
Trim36Q80WG7 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.03□□□□□ -0.32
Trim36Q80WG7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.03□□□□□ -0.32
Trim36Q80WG7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim36Q80WG7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim36Q80WG7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.02□□□□□ -0.33
Trim36Q80WG7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.02□□□□□ -0.33
Trim36Q80WG7 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.02□□□□□ -0.33
Trim36Q80WG7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.02□□□□□ -0.33
Trim36Q80WG7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.02□□□□□ -0.33
Trim36Q80WG7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim36Q80WG7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim36Q80WG7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim36Q80WG7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim36Q80WG7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim36Q80WG7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trim36Q80WG7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim36Q80WG7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim36Q80WG7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms