Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Gm26464-201ENSMUST00000157094 305 ntBASIC15.55■□□□□ 0.08
Prpf40bQ80W14 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf40bQ80W14 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Mir877-201ENSMUST00000104738 85 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.54■□□□□ 0.08
Prpf40bQ80W14 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm11803-201ENSMUST00000119966 444 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm26083-201ENSMUST00000157904 193 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm43758-201ENSMUST00000199500 367 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf40bQ80W14 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf40bQ80W14 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms