Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm7809-201ENSMUST00000153199 742 ntBASIC11.35□□□□□ -0.59
Rif1Q6PR54 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rif1Q6PR54 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm19091-201ENSMUST00000208120 978 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm9996-201ENSMUST00000070359 913 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm14350-201ENSMUST00000116642 640 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Gm45500-201ENSMUST00000211676 803 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.34□□□□□ -0.59
Rif1Q6PR54 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rif1Q6PR54 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Rif1Q6PR54 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rif1Q6PR54 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rif1Q6PR54 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rif1Q6PR54 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm45433-201ENSMUST00000209386 247 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms