Protein–RNA interactions for Protein: Q6PHS6

Snx13, Sorting nexin-13, mousemouse

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx13Q6PHS6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snx13Q6PHS6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Gm10175-201ENSMUST00000086013 645 ntBASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snx13Q6PHS6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Gm8927-201ENSMUST00000181978 981 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Gm16476-201ENSMUST00000221544 139 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Gm3222-201ENSMUST00000071282 990 ntBASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Snx13Q6PHS6 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Snx13Q6PHS6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snx13Q6PHS6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms