Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf220Q6PDX6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf220Q6PDX6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Gm45098-201ENSMUST00000207179 657 ntBASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf220Q6PDX6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gm14140-201ENSMUST00000119999 995 ntBASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gm27301-201ENSMUST00000184012 127 ntBASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gm45747-201ENSMUST00000212203 999 ntBASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf220Q6PDX6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf220Q6PDX6 Gm37230-201ENSMUST00000194491 818 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms