Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Casc4Q6P2L7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Gm43094-201ENSMUST00000196549 921 ntBASIC13.67□□□□□ -0.22
Casc4Q6P2L7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.67□□□□□ -0.22
Casc4Q6P2L7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Casc4Q6P2L7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Casc4Q6P2L7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gm18041-201ENSMUST00000218210 618 ntBASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gm15823-201ENSMUST00000064305 670 ntBASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Casc4Q6P2L7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
Casc4Q6P2L7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Casc4Q6P2L7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Casc4Q6P2L7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Casc4Q6P2L7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms