Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm12390-201ENSMUST00000117897 397 ntBASIC15.89■□□□□ 0.13
Ctr9Q62018 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.89■□□□□ 0.13
Ctr9Q62018 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.89■□□□□ 0.13
Ctr9Q62018 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Gm27486-201ENSMUST00000184923 80 ntBASIC15.89■□□□□ 0.13
Ctr9Q62018 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.89■□□□□ 0.13
Ctr9Q62018 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.89■□□□□ 0.13
Ctr9Q62018 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ctr9Q62018 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm6152-201ENSMUST00000151704 340 ntBASIC15.88■□□□□ 0.13
Ctr9Q62018 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm8598-201ENSMUST00000221184 836 ntBASIC15.88■□□□□ 0.13
Ctr9Q62018 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.88■□□□□ 0.13
Ctr9Q62018 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.88■□□□□ 0.13
Ctr9Q62018 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.88■□□□□ 0.13
Ctr9Q62018 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ctr9Q62018 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Ctr9Q62018 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.87■□□□□ 0.13
Ctr9Q62018 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
Ctr9Q62018 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ctr9Q62018 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ctr9Q62018 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms