Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav5d-4Q5R1F6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15920-201ENSMUST00000118998 402 ntBASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Mir8102-201ENSMUST00000184148 139 ntBASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms