Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Gm45841-201ENSMUST00000207700 164 ntBASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim58Q5NCC9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Gm38144-201ENSMUST00000192790 465 ntBASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Gm42612-201ENSMUST00000197986 623 ntBASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Gm43170-201ENSMUST00000199827 612 ntBASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim58Q5NCC9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim58Q5NCC9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Gm5354-201ENSMUST00000182417 973 ntBASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Mir7221-201ENSMUST00000184009 72 ntBASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Gm7730-201ENSMUST00000212486 454 ntBASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim58Q5NCC9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms