Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gm8062-201ENSMUST00000139696 444 ntBASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gm43818-201ENSMUST00000200605 466 ntBASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rc3h1Q4VGL6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Gm13392-201ENSMUST00000117708 150 ntBASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Snora78-201ENSMUST00000158630 128 ntBASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.54■□□□□ 0.08
Rc3h1Q4VGL6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Gm12384-201ENSMUST00000119228 919 ntBASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Gm4271-201ENSMUST00000174444 973 ntBASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rc3h1Q4VGL6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms