Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Gm18905-201ENSMUST00000205454 928 ntBASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syne3Q4FZC9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syne3Q4FZC9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syne3Q4FZC9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syne3Q4FZC9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Syne3Q4FZC9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Syne3Q4FZC9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Gm44719-201ENSMUST00000206404 149 ntBASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne3Q4FZC9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.32□□□□□ -0.12
Syne3Q4FZC9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne3Q4FZC9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms