Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Gm8062-201ENSMUST00000139696 444 ntBASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Gm37497-201ENSMUST00000195830 798 ntBASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38aQ4FK66 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf38aQ4FK66 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf38aQ4FK66 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf38aQ4FK66 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Prpf38aQ4FK66 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf38aQ4FK66 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Gm13392-201ENSMUST00000117708 150 ntBASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Gm6447-201ENSMUST00000118905 835 ntBASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Gm13369-201ENSMUST00000119442 987 ntBASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38aQ4FK66 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Rubie-203ENSMUST00000227803 2430 ntBASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Gm37922-201ENSMUST00000195596 455 ntBASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38aQ4FK66 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Gm23931-201ENSMUST00000103842 109 ntBASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Gm11618-201ENSMUST00000117946 267 ntBASIC15.68■□□□□ 0.1
Prpf38aQ4FK66 Gm1335-201ENSMUST00000121653 386 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms