Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.05■□□□□ 0.16
SfswapQ3USH5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Gm13392-201ENSMUST00000117708 150 ntBASIC16.05■□□□□ 0.16
SfswapQ3USH5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Gm37424-201ENSMUST00000191727 561 ntBASIC16.05■□□□□ 0.16
SfswapQ3USH5 Gm6007-201ENSMUST00000208170 823 ntBASIC16.05■□□□□ 0.16
SfswapQ3USH5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfswapQ3USH5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.04■□□□□ 0.16
SfswapQ3USH5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Gm8213-201ENSMUST00000118191 441 ntBASIC16.04■□□□□ 0.16
SfswapQ3USH5 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.04■□□□□ 0.16
SfswapQ3USH5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
SfswapQ3USH5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Gm12384-201ENSMUST00000119228 919 ntBASIC16.03■□□□□ 0.16
SfswapQ3USH5 Gm13369-201ENSMUST00000119442 987 ntBASIC16.03■□□□□ 0.16
SfswapQ3USH5 Gm17420-201ENSMUST00000164753 153 ntBASIC16.03■□□□□ 0.16
SfswapQ3USH5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.03■□□□□ 0.16
SfswapQ3USH5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.03■□□□□ 0.16
SfswapQ3USH5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfswapQ3USH5 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.03■□□□□ 0.16
SfswapQ3USH5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.02■□□□□ 0.16
SfswapQ3USH5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.02■□□□□ 0.16
SfswapQ3USH5 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.02■□□□□ 0.16
SfswapQ3USH5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfswapQ3USH5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms