Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Gm12266-201ENSMUST00000120311 962 ntBASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Gm4862-201ENSMUST00000170405 438 ntBASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Gm3793-201ENSMUST00000204973 672 ntBASIC12.3□□□□□ -0.44
Spg11Q3UHA3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Spg11Q3UHA3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Mir181d-201ENSMUST00000102383 72 ntBASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm9463-201ENSMUST00000206707 601 ntBASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm15881-201ENSMUST00000148792 942 ntBASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spg11Q3UHA3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Gm22138-201ENSMUST00000158748 128 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms