Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gm8097-201ENSMUST00000117903 829 ntBASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gm10275-202ENSMUST00000168697 495 ntBASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gm8000-201ENSMUST00000188378 592 ntBASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gm10275-201ENSMUST00000092620 635 ntBASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gm44745-201ENSMUST00000206563 2723 ntBASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccbe1Q3MI99 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccbe1Q3MI99 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms